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  5. Cpa|evm.model.tig00021105.35

Cpa|evm.model.tig00021105.35 (tig00021105_g18244.t1)


Aliases : tig00021105_g18244.t1

Description : DNA repair protein RAD5B OS=Arabidopsis thaliana


Gene families : OG_01_0000210 (OrthoFinder) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021105.35
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
EOD04701 No alias Helicase, C-terminal [Interproscan]. 0.03 OrthoFinder
EOD09255 No alias Helicase, C-terminal [Interproscan]. 0.03 OrthoFinder
EOD20818 No alias Helicase, C-terminal [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 328 632
IPR014905 HIRAN 69 184
IPR001650 Helicase_C 892 989
No external refs found!