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  5. EOD29367

EOD29367


Description : 26S proteasome regulatory subunit, C-terminal; Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0003737 (OrthoFinder) Phylogenetic Tree(s): OG0003737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD29367
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020614.5 tig00020614_g12118.t1 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder
Cre06.g275650 30779008, RPN3 Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder
Dusal.0002s00007.1 33187994 26S proteasome regulatory subunit, C-terminal;... 0.02 OrthoFinder
PTI_01G05790.1 No alias 26S proteasome regulatory subunit, C-terminal;... 0.07 OrthoFinder
Sro229_g093060.1 Contig429.g5810 Probable 26S proteasome non-ATPase regulatory subunit 3 0.1 OrthoFinder
Transcript_contig_54399 54399 Proteasome component (PCI) domain; 26S proteasome... 0.01 OrthoFinder
lcl|BLLF01000519.1_cds_GFH12605.1_7082 HaLaN_08319, GFH12605 PCI domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56886.1_9761 PRW56886 Putative 26S proteasome non-ATPase regulatory subunit 3 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495167.1_3697 KAA8495167 26S proteasome non-ATPase regulatory subunit 3 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEA Interproscan
MF GO:0030234 enzyme regulator activity IEA Interproscan
BP GO:0042176 regulation of protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013586 26S_Psome_reg_C 314 381
IPR000717 PCI_dom 213 309
No external refs found!