EOD28536

Description : Zinc finger, RING-type [Interproscan].

Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD28536
Cluster	HCCA: Cluster_217

Target	Alias	Description	ECC score	Gene Family Method
Cz09g32200.t1	No alias	Zinc finger, RING-type [Interproscan].	0.02	OrthoFinder
Dusal.0110s00028.1	33194367	Zinc finger, RING-type [Interproscan].	0.04	OrthoFinder
Vocar.0027s0070.1	32887136	Zinc finger, RING-type [Interproscan].	0.01	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495598.1_1596	KAA8495598	E3 ubiquitin-protein ligase	0.01	OrthoFinder
lcl\|VRMN01000018.1_cds_KAA8490872.1_5644	KAA8490872	E3 ubiquitin protein ligase RIE1	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006325	chromatin organization	IEP	Enrichment
BP	GO:0006334	nucleosome assembly	IEP	Enrichment
BP	GO:0016043	cellular component organization	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0034728	nucleosome organization	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
BP	GO:0065004	protein-DNA complex assembly	IEP	Enrichment
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Enrichment
BP	GO:0071840	cellular component organization or biogenesis	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	117	165

External Links

No external refs found!