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  5. Cpa|evm.model.tig00021073.18

Cpa|evm.model.tig00021073.18 (tig00021073_g18021.t1)


Aliases : tig00021073_g18021.t1

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021073.18
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398252 30780830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.01 OrthoFinder
Sro389_g132520.1 Contig669.g7869 Daunorubicin C-13 ketoreductase DnrU 0.01 OrthoFinder
Vocar.0009s0212.1 32893551 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 22 207
No external refs found!