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  5. EOD27130

EOD27130


Description : U3 small nucleolar ribonucleoprotein complex, subunit Mpp10 [Interproscan].


Gene families : OG_01_0004112 (OrthoFinder) Phylogenetic Tree(s): OG0004112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD27130
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020604.12 tig00020604_g11847.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre08.g370601 30774105 Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder
Cz05g15180.t1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.03 OrthoFinder
Cz05g15190.t1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.04 OrthoFinder
OT_05G01480.1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.11 OrthoFinder
PTI_12G00600.1 No alias U3 small nucleolar ribonucleoprotein complex, subunit... 0.14 OrthoFinder
Sro767_g199410.1 Contig2377.g19529 Nucleolar ribonucleoprotein protein MPP10 0.16 OrthoFinder
XM_002507036.1 MICPUN_113197, 113197 U3 small nucleolar ribonucleoprotein component (MPP10) 0.05 OrthoFinder
XM_003056286.1 MicpuC2_70680, 70680 U3 small nucleolar ribonucleoprotein component (MPP10) 0.02 OrthoFinder
lcl|BLLF01002042.1_cds_GFH22447.1_16924 HaLaN_19916, GFH22447 U3 small nucleolar ribonucleoprotein complex, subunit... 0.03 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59087.1_7023 PRW59087 U3 small nucleolar ribonucleo MPP10-like isoform X1 0.09 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492630.1_9323 KAA8492630 U3 small nucleolar ribonucleoprotein MPP10 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0034457 Mpp10 complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR012173 Mpp10 21 118
IPR012173 Mpp10 119 345
No external refs found!