EOD26829


Description : Hypothetical protein [Ensembl].


Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD26829
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000404.28 tig00000404_g390.t1 Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g507200 30791912 No description available 0.01 OrthoFinder
OT_09G00420.1 No alias U box domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
TP14G00860.1 No alias U box domain; Ankyrin repeats (many copies) [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54040 54040 U box domain; WD40 repeat [Interproscan]. 0.01 OrthoFinder
XM_003056755.1 MicpuC2_56233, 56233 WD40 repeat protein 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58217.1_7785 PRW58217 U box domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!