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  5. EOD25591

EOD25591


Description : Vacuolar protein sorting-associated protein 13, C-terminal; GRAM domain; Pleckstrin homology domain; Vacuolar protein sorting-associated protein 13, N-terminal domain; Vacuolar protein sorting-associated protein 13, second N-terminal domain; Ankyrin repeat-containing domain; Ankyrin repeat [Interproscan].


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD25591
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.91 tig00000042_g15491.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000459.51 tig00000459_g1113.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020554.153 tig00020554_g10931.t1 No description available 0.01 OrthoFinder
Cre12.g483500 30792128 No description available 0.02 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
Cz02g20010.t1 No alias Vacuolar protein sorting-associated protein 62 [Interproscan]. 0.02 OrthoFinder
Cz14g16120.t1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Dusal.0595s00006.1 33191199 Hypothetical protein 0.02 OrthoFinder
OT_15G01640.1 No alias Vacuolar protein sorting-associated protein 13, second... 0.01 OrthoFinder
Transcript_contig_53733 53733 Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
Vocar.0031s0042.1 32890189 VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
XM_002506972.1 MICPUN_54783, 54783 Vacuolar protein sorting-associated protein 13, second... 0.03 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13478.1_7955 HaLaN_09371, GFH13478 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0032958 inositol phosphate biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 3 114
IPR031646 VPS13_N2 137 386
IPR031645 VPS13_C 3896 4071
IPR004182 GRAM 2585 2640
IPR020683 Ankyrin_rpt-contain_dom 3465 3558
IPR002110 Ankyrin_rpt 1965 1990
IPR001849 PH_domain 2135 2227
No external refs found!