1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD24687

EOD24687


Description : Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl].


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD24687
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.69 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.06 OrthoFinder
Cpa|evm.model.tig00020965.70 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.04 OrthoFinder
Cpa|evm.model.tig00021012.26 tig00021012_g17007.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder
Cpa|evm.model.tig00021579.19 tig00021579_g22443.t1 Cryptochrome-1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz04g35200.t1 No alias Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.05 OrthoFinder
Cz04g36010.t1 No alias DNA photolyase, N-terminal [Interproscan]. 0.04 OrthoFinder
Cz09g17160.t1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.03 OrthoFinder
Dusal.0203s00017.1 33199258 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
Dusal.0345s00010.1 33198539 DNA photolyase, N-terminal [Interproscan]. 0.02 OrthoFinder
OT_15G01070.1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.03 OrthoFinder
PTI_08G03200.1 No alias Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
Sro147_g068020.1 Contig246.g3025 Cryptochrome DASH, chloroplastic/mitochondrial 0.02 OrthoFinder
Sro2726_g335660.1 Contig3579.g27670 Cryptochrome DASH 0.02 OrthoFinder
Sro580_g170080.1 Contig2039.g17523 Deoxyribodipyrimidine photo-lyase 0.04 OrthoFinder
Transcript_contig_56266 56266 DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
Transcript_contig_89944 89944 DNA photolyase, N-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0198.1 32890551 Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder
XM_002503843.1 MICPUN_59952, 59952 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
XM_002508739.1 MICPUN_61974, 61974 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.04 OrthoFinder
lcl|BLLF01001533.1_cds_GFH19869.1_14346 HaLaN_16894, GFH19869 Photolyase/cryptochrome alpha/beta domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 657 848
IPR006050 DNA_photolyase_N 339 533
No external refs found!