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Description : GRIM-19 [Interproscan].
Gene families : OG_01_0003150 (OrthoFinder) Phylogenetic Tree(s): OG0003150_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD24517 | |
| Cluster | HCCA: Cluster_70 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021352.20 | tig00021352_g20688.t1 | No description available | 0.03 | OrthoFinder | |
| Cz03g20130.t1 | No alias | GRIM-19 [Interproscan]. | 0.01 | OrthoFinder | |
| PTI_13G01070.1 | No alias | GRIM-19 [Interproscan]. | 0.02 | OrthoFinder | |
| Sro427_g140650.1 | Contig2653.g21436 | 1 alpha subcomplex subunit 13 | 0.01 | OrthoFinder | |
| TP19G01160.1 | No alias | GRIM-19 [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|VRMN01000012.1_cds_KAA8491730.1_5198 | KAA8491730 | NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 13-A | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | Enrichment |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Enrichment |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Enrichment |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Enrichment |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| CC | GO:0031090 | organelle membrane | IEP | Enrichment |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Enrichment |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Enrichment |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Enrichment |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009346 | GRIM-19 | 18 | 129 |
| No external refs found! |