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  5. Cpa|evm.model.tig00000147.55

Cpa|evm.model.tig00000147.55 (tig00000147_g9495.t1)


Aliases : tig00000147_g9495.t1

Description : Oligoribonuclease OS=Arabidopsis thaliana


Gene families : OG_01_0004135 (OrthoFinder) Phylogenetic Tree(s): OG0004135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000147.55
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre10.g425800 30790139, ORN1 Oligoribonuclease OS=Arabidopsis thaliana 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Enrichment
MF GO:0008409 5'-3' exonuclease activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 16 178
No external refs found!