EOD24296

Description : RNA recognition motif domain [Interproscan].

Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD24296
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
Cz06g14010.t1	No alias	RNA recognition motif domain [Interproscan].	0.03	OrthoFinder
EOD23470	No alias	RNA recognition motif domain [Interproscan].	0.05	OrthoFinder
PTI_06G03380.1	No alias	RNA recognition motif domain [Interproscan].	0.03	OrthoFinder
PTI_06G04480.1	No alias	RNA recognition motif domain [Interproscan].	0.01	OrthoFinder
Sro1330_g263450.1	Contig4401.g33064	29 kDa ribonucleoprotein A, chloroplastic	0.01	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497282.1_1011	KAA8497282	Glycine-rich RNA-binding protein	0.02	OrthoFinder
lcl\|VRMN01000008.1_cds_KAA8493035.1_2771	KAA8493035	Cold-inducible RNA-binding protein B	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006897	endocytosis	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	53	123

External Links

No external refs found!