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  5. Cpa|evm.model.tig00021038.65

Cpa|evm.model.tig00021038.65 (tig00021038_g17551.t1)


Aliases : tig00021038_g17551.t1

Description : Histone H3.3a OS=Lilium longiflorum


Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021038.65
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000262.5 tig00021071_g17953.t1 Histone H3.3a OS=Lilium longiflorum 0.15 OrthoFinder
Cpa|evm.model.tig00000381.14 tig00000970_g5845.t1 Histone H3.3a OS=Lilium longiflorum 0.05 OrthoFinder
Cpa|evm.model.tig00000836.6 tig00000836_g4689.t1 Histone H3-like 2 OS=Arabidopsis thaliana 0.07 OrthoFinder
Cpa|evm.model.tig00001007.15 tig00021071_g17953.t1 Histone H3.3a OS=Lilium longiflorum 0.03 OrthoFinder
Cpa|evm.model.tig00020516.11 tig00020781_g13702.t1 Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder
Cpa|evm.model.tig00020693.4 tig00020693_g13009.t1 Histone H3.3a OS=Lilium longiflorum 0.07 OrthoFinder
Cpa|evm.model.tig00021071.7 tig00021071_g17953.t1 Histone H3.3a OS=Lilium longiflorum 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 123
No external refs found!