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  5. EOD23777

EOD23777


Description : Ribosomal protein S30 [Interproscan].


Gene families : OG_01_0004587 (OrthoFinder) Phylogenetic Tree(s): OG0004587_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD23777
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001003.33 tig00001003_g6288.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre16.g666301 30777782, RPS30 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
PTI_04G04400.1 No alias Ribosomal protein S30 [Interproscan]. 0.06 OrthoFinder
Sro1093_g240360.1 Contig384.g5162 40S ribosomal protein S30 0.06 OrthoFinder
TP01G05720.1 No alias Ribosomal protein S30 [Interproscan]. 0.02 OrthoFinder
Vocar.0066s0009.1 32891752 Ribosomal protein S30 [Interproscan]. 0.02 OrthoFinder
XM_002502986.1 MICPUN_59642, 59642 Ribosomal protein S30; Ribosomal protein S15 [Interproscan]. 0.02 OrthoFinder
XM_003058671.1 MicpuC2_57777, 57777 Ribosomal protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005758 mitochondrial intermembrane space IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
MF GO:0016530 metallochaperone activity IEP Enrichment
MF GO:0016531 copper chaperone activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031970 organelle envelope lumen IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 58
No external refs found!