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  5. EOD23160

EOD23160


Description : Cell division cycle protein 48 [Ensembl].


Gene families : OG_01_0000083 (OrthoFinder) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD23160
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Dusal.0191s00006.1 33186464 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
PTI_10G03770.1 No alias AAA ATPase, AAA+ lid domain; CDC48, N-terminal... 0.02 OrthoFinder
Sro66_g037380.1 Contig399.g5408 Transitional endoplasmic reticulum ATPase 0.03 OrthoFinder
Sro66_g037380.2 No alias ATPase, AAA-type, core; CDC48, N-terminal subdomain; AAA... 0.05 OrthoFinder
Sro98_g050450.1 Contig3362.g26337 Transitional endoplasmic reticulum ATPase 0.04 OrthoFinder
TP04G04850.1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.07 OrthoFinder
TP05G03870.1 No alias ATPase, AAA-type, core; CDC48, domain 2; AAA ATPase,... 0.03 OrthoFinder
XM_003057401.1 MicpuC2_32537, 32537 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core... 0.02 OrthoFinder
lcl|BLLF01002883.1_cds_GFH25671.1_20148 HaLaN_23672, GFH25671 Spastin 0.01 OrthoFinder
lcl|BLLF01009482.1_cds_GFH33736.1_28213 HaLaN_33147, GFH33736 ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18391.1_5820 PRW18391 Cell division cycle 48-like protein 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495179.1_3709 KAA8495179 Nuclear valosin-containing protein-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008521 acetyl-CoA transmembrane transporter activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015215 nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Enrichment
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
MF GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 347 479
IPR003959 ATPase_AAA_core 502 621
IPR003338 CDC4_N-term_subdom 75 155
No external refs found!