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  5. EOD22725

EOD22725


Description : Putative ABC transporter [Ensembl].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD22725
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021434.18 tig00021434_g21315.t1 ABC transporter B family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder
Dusal.1005s00005.1 33195266 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
OT_07G03200.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro83_g044320.1 Contig4450.g33406 Lactococcin transport/processing ATP-binding protein LcnC-like 0.02 OrthoFinder
Vocar.0001s1440.1 32884741 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Vocar.0028s0139.1 32895550 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
XM_003057414.1 MicpuC2_15544, 15544 ATP-binding cassette superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 97 246
No external refs found!