EOD22582

Description : Ribosomal protein S5, C-terminal [Interproscan].

Gene families : OG_01_0002382 (OrthoFinder) Phylogenetic Tree(s): OG0002382_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD22582
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g039250	30788560, RPS2	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder
OT_17G01420.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.04	OrthoFinder
PTI_17G01720.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.05	OrthoFinder
Sro693_g188270.1	Contig3212.g25392	40S ribosomal protein S2 (Fragment)	0.06	OrthoFinder
TP10G03790.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.03	OrthoFinder
Transcript_contig_51260	51260	Ribosomal protein S5, C-terminal [Interproscan].	0.02	OrthoFinder
Transcript_contig_79122	79122	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.01	OrthoFinder
XM_003063973.1	MicpuC2_49763, 49763	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497763.1_6716	KAA8497763	40S ribosomal protein S2	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Enrichment
BP	GO:0006457	protein folding	IEP	Enrichment
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
CC	GO:0016272	prefoldin complex	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Enrichment
MF	GO:0051082	unfolded protein binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005324	Ribosomal_S5_C	13	53

External Links

No external refs found!

EOD22582

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation