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Description : E3 ubiquitin ligase [Ensembl].
Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD22353 | |
| Cluster | HCCA: Cluster_287 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_03G05800.1 | No alias | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| SymbC1.scaffold2102.3 | 2102.3 | Regulator of chromosome condensation (RCC1) repeat;... | 0.01 | OrthoFinder | |
| Transcript_contig_10133 | 10133 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.01 | OrthoFinder | |
| Vocar.0078s0015.1 | 32891714 | Regulator of chromosome condensation (RCC1) repeat... | 0.01 | OrthoFinder | |
| XM_003062733.1 | MicpuC2_42406, 42406 | Regulator of chromosome condensation, RCC1 [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003063490.1 | MicpuC2_53295, 53295 | Regulator of chromosome condensation, RCC1; Ankyrin... | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59483.1_6331 | PRW59483 | Ultraviolet-B receptor UVR8 isoform A | 0.02 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59484.1_6332 | PRW59484 | Ultraviolet-B receptor UVR8 isoform B | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Enrichment |
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
| CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| No external refs found! |