EOD22067


Description : Proteasome, subunit alpha/beta; Proteasome alpha-subunit, N-terminal domain [Interproscan].


Gene families : OG_01_0003856 (OrthoFinder) Phylogenetic Tree(s): OG0003856_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD22067
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cre14.g619550 30776161, POA7 Protein degradation.26S proteasome.20S core... 0.16 OrthoFinder
Cz03g23070.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
Dusal.0179s00015.1 33190115 Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
OT_10G03110.1 No alias Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder
PTI_26G01000.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.13 OrthoFinder
Sro1315_g262060.1 Contig2837.g22770 Proteasome subunit alpha type-3 (Fragment) 0.21 OrthoFinder
TP01G11230.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.13 OrthoFinder
Vocar.0026s0116.1 32892464 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.03 OrthoFinder
XM_002503515.1 MICPUN_108591, 108591 Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
XM_003055523.1 MicpuC2_50364, 50364 Proteasome, subunit alpha/beta; Proteasome... 0.04 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59304.1_7323 PRW59304 20S proteasome alpha subunit G 0.07 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496150.1_2148 KAA8496150 Proteasome subunit alpha type-3 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 88
IPR000426 Proteasome_asu_N 8 30
No external refs found!