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  5. EOD21898

EOD21898


Description : Polyketide synthase [Ensembl].


Gene families : OG_01_0000078 (OrthoFinder) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21898
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
OT_02G00150.1 No alias Phosphopantetheine binding ACP domain; Polyketide... 0.01 OrthoFinder
SymbC1.scaffold396.11 396.11 Beta-ketoacyl synthase, C-terminal; Polyketide synthase,... 0.01 OrthoFinder
SymbC1.scaffold396.9 396.9 Beta-ketoacyl synthase, N-terminal; Polyketide synthase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001242 Condensatn 6637 6765
IPR009081 PP-bd_ACP 1807 1871
IPR009081 PP-bd_ACP 1230 1294
IPR009081 PP-bd_ACP 2383 2436
IPR009081 PP-bd_ACP 4970 5034
IPR009081 PP-bd_ACP 3665 3729
IPR014030 Ketoacyl_synth_N 1320 1561
IPR014030 Ketoacyl_synth_N 3755 3996
IPR014030 Ketoacyl_synth_N 1897 2138
IPR014030 Ketoacyl_synth_N 5060 5301
IPR014030 Ketoacyl_synth_N 2462 2700
IPR014031 Ketoacyl_synth_C 1575 1691
IPR014031 Ketoacyl_synth_C 5315 5431
IPR014031 Ketoacyl_synth_C 2711 2827
IPR014031 Ketoacyl_synth_C 2152 2268
IPR014031 Ketoacyl_synth_C 4010 4126
IPR013968 PKS_KR 4699 4873
IPR013968 PKS_KR 958 1133
IPR013968 PKS_KR 6322 6497
IPR013968 PKS_KR 3394 3568
IPR020807 PKS_dehydratase 4210 4452
IPR020807 PKS_dehydratase 2905 3147
IPR020807 PKS_dehydratase 151 393
IPR020807 PKS_dehydratase 5515 5757
No external refs found!