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  5. EOD21818

EOD21818


Description : Ribosomal protein S17e [Interproscan].


Gene families : OG_01_0002798 (OrthoFinder) Phylogenetic Tree(s): OG0002798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21818
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cre12.g498250 30793608, RPS17 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cz02g24100.t1 No alias Ribosomal protein S17e [Interproscan]. 0.05 OrthoFinder
Dusal.0462s00007.1 33197488 Ribosomal protein S17e [Interproscan]. 0.04 OrthoFinder
OT_04G05050.1 No alias Ribosomal protein S17e [Interproscan]. 0.05 OrthoFinder
PTI_05G01130.1 No alias Ribosomal protein S17e [Interproscan]. 0.06 OrthoFinder
Sro13_g009690.1 Contig337.g4510 40S ribosomal protein S17 0.06 OrthoFinder
TP16G00420.1 No alias Ribosomal protein S17e [Interproscan]. 0.08 OrthoFinder
Transcript_contig_80128 80128 Ribosomal protein S17e [Interproscan]. 0.01 OrthoFinder
Vocar.0006s0265.1 32893973 Ribosomal protein S17e [Interproscan]. 0.03 OrthoFinder
XM_002504075.1 MICPUN_76945, 76945 Ribosomal protein S17e [Interproscan]. 0.06 OrthoFinder
XM_003059599.1 MicpuC2_34073, 34073 Ribosomal protein S17e [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003084.1_cds_GFH26294.1_20771 HaLaN_24421, GFH26294 Ribosomal protein S17e [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56597.1_9573 PRW56597 40S ribosomal S17 isoform A 0.05 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491192.1_5820 KAA8491192 40S ribosomal protein S17 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001210 Ribosomal_S17e 3 118
No external refs found!