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  5. EOD21430

EOD21430


Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21430
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020960.24 tig00020960_g16545.t1 Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana 0.01 OrthoFinder
Transcript_contig_67487 67487 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
Vocar.0032s0115.1 32893725 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
XM_002502289.1 MICPUN_58978, 58978 SNF2 super family 0.01 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05550.1_27 HaLaN_00030, GFH05550 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44381.1_2263 PRW44381 Chromodomain-helicase-DNA-binding 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 182 464
IPR001650 Helicase_C 534 642
No external refs found!