EOD21422


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD21422
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
OT_07G01620.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
PTI_01G01590.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
SymbC1.scaffold2220.1 2220.1 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01003949.1_cds_GFH28596.1_23073 HaLaN_27113, GFH28596 ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56046.1_9960 PRW56046 Multidrug resistance-associated 1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 890 1038
IPR003439 ABC_transporter-like_ATP-bd 259 391
IPR011527 ABC1_TM_dom 27 203
IPR011527 ABC1_TM_dom 561 823
No external refs found!