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  5. EOD20037

EOD20037


Description : ARL1, ARF-like GTPase [Ensembl].


Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD20037
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.129 tig00021127_g18809.t2 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder
Cre02.g102000 30785410, ARL5 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g486250 30793268, ARL6 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cre12.g487850 30791682 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder
Cz05g21190.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
Cz13g04090.t1 No alias Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Dusal.0088s00030.1 33203564 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
Dusal.0175s00026.1 33199731 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
Sro229_g093190.1 Contig429.g5823 ADP-ribosylation factor 0.01 OrthoFinder
Sro695_g188620.1 Contig4098.g31309 ADP-ribosylation factor 0.01 OrthoFinder
Vocar.0016s0153.1 32898073 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.02 OrthoFinder
Vocar.0043s0071.1 32886888 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.01 OrthoFinder
XM_003055367.1 MicpuC2_30690, 30690 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.03 OrthoFinder
XM_003063983.1 MicpuC2_30191, 30191 Small GTPase superfamily, ARF/SAR type [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44304.1_2340 PRW44304 Arf6-family small GTPase 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495757.1_1755 KAA8495757 ADP-ribosylation factor 1 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 6 122
No external refs found!