EOD19945

Description : Cold-shock protein, DNA-binding [Interproscan].

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD19945
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
PTI_09G04000.1	No alias	Cold-shock protein, DNA-binding [Interproscan].	0.02	OrthoFinder
PTI_18G02010.1	No alias	Cold-shock protein, DNA-binding [Interproscan].	0.02	OrthoFinder
Sro2322_g323260.1	Contig3734.g28638	Lin-28 homolog A	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496404.1_133	KAA8496404	Cold shock domain-containing protein 4	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8496405.1_134	KAA8496405	Cold shock domain-containing protein 4	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	29	83
IPR002059	CSP_DNA-bd	108	169

External Links

No external refs found!