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  5. Cpa|evm.model.tig00021013.28

Cpa|evm.model.tig00021013.28 (tig00021013_g17056.t1)


Aliases : tig00021013_g17056.t1

No description available


Gene families : OG_01_0001074 (OrthoFinder) Phylogenetic Tree(s): OG0001074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021013.28
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold3016.1 3016.1 Association with the SNF1 complex (ASC) domain;... 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58496.1_7814 PRW58496 SNF1-related kinase regulatory subunit beta-2 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494671.1_3201 KAA8494671 5'-AMP-activated protein kinase subunit beta-2 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
InterPro domains Description Start Stop
IPR032640 AMPK1_CBM 20 94
No external refs found!