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Description : Photosystem II PsbM [Interproscan].
Gene families : OG_01_0006125 (OrthoFinder) Phylogenetic Tree(s): OG0006125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD19571 | |
| Cluster | HCCA: Cluster_76 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD08471 | No alias | Photosystem II PsbM [Interproscan]. | 0.03 | OrthoFinder | |
| EOD12046 | No alias | Photosystem II PsbM [Interproscan]. | 0.03 | OrthoFinder | |
| Sro453_g146060.1 | Contig1693.g15163 | Photosystem II PsbM [Interproscan]. | 0.02 | OrthoFinder | |
| TP03G06250.1 | No alias | Hypothetical protein | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009523 | photosystem II | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| BP | GO:0019684 | photosynthesis, light reaction | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| BP | GO:0016540 | protein autoprocessing | IEP | Enrichment |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Enrichment |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Enrichment |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Enrichment |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007826 | PSII_PsbM | 80 | 108 |
| No external refs found! |