Description : Helicase, C-terminal; Domain of unknown function DUF1605; Helicase-associated domain [Interproscan].
Gene families : OG_01_0000129 (OrthoFinder) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD19502 | |
Cluster | HCCA: Cluster_224 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000786.1 | tig00000786_g4048.t1 | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Cre03.g171650 | 30786928 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre12.g492450 | 30792289 | DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cz05g07080.t1 | No alias | Helicase, C-terminal; Domain of unknown function... | 0.03 | OrthoFinder | |
Dusal.0260s00001.1 | 33185455 | Helicase, C-terminal; Helicase-associated domain;... | 0.02 | OrthoFinder | |
OT_18G01660.1 | No alias | Helicase-associated domain; Helicase, C-terminal; Domain... | 0.03 | OrthoFinder | |
Sro947_g223440.1 | Contig4683.g34828 | Putative ATP-dependent RNA helicase DHX30 | 0.01 | OrthoFinder | |
Vocar.0002s0213.1 | 32890657 | Domain of unknown function DUF1605; DEAD/DEAH box... | 0.02 | OrthoFinder | |
XM_002500677.1 | MICPUN_65643, 65643 | Helicase, C-terminal; Helicase-associated domain;... | 0.02 | OrthoFinder | |
XM_002503731.1 | MICPUN_59722, 59722 | Helicase, C-terminal; Helicase-associated domain; Domain... | 0.02 | OrthoFinder | |
XM_002507013.1 | MICPUN_77912, 77912 | Helicase, C-terminal; Helicase-associated domain;... | 0.02 | OrthoFinder | |
lcl|LHPG02000005.1_cds_PRW58696.1_7838 | PRW58696 | Helicase domain-containing | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
CC | GO:0001401 | SAM complex | IEP | Enrichment |
MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006298 | mismatch repair | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
BP | GO:0010038 | response to metal ion | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Enrichment |
BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
CC | GO:0030117 | membrane coat | IEP | Enrichment |
CC | GO:0030120 | vesicle coat | IEP | Enrichment |
CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0042221 | response to chemical | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
BP | GO:0046937 | phytochelatin metabolic process | IEP | Enrichment |
BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Enrichment |
BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
No external refs found! |