1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021012.34

Cpa|evm.model.tig00021012.34 (tig00021012_g17014.t1)


Aliases : tig00021012_g17014.t1

Description : DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana


Gene families : OG_01_0002745 (OrthoFinder) Phylogenetic Tree(s): OG0002745_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021012.34
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre07.g334200 30774219 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz02g00210.t1 No alias DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
EOD33658 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Transcript_contig_54948 54948 DEAD/DEAH box helicase domain [Interproscan]. 0.02 OrthoFinder
XM_002505112.1 MICPUN_62373, 62373 DEAD/DEAH box helicase 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56144.1_9991 PRW56144 DEAD-box ATP-dependent RNA helicase 35 isoform A 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
BP GO:0032879 regulation of localization IEP Enrichment
BP GO:0032886 regulation of microtubule-based process IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0051270 regulation of cellular component movement IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0060632 regulation of microtubule-based movement IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 297 464
IPR001650 Helicase_C 500 607
No external refs found!