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  5. Cpa|evm.model.tig00021012.22

Cpa|evm.model.tig00021012.22 (tig00021012_g17003.t1)


Aliases : tig00021012_g17003.t1

Description : Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor


Gene families : OG_01_0000314 (OrthoFinder) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021012.22

Target Alias Description ECC score Gene Family Method Actions
Dusal.0991s00002.1 33185743 Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder
OT_14G01110.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.2 OrthoFinder
Transcript_contig_55026 55026 Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
lcl|BLLF01002847.1_cds_GFH25556.1_20033 HaLaN_23540, GFH25556 SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 527 638
IPR000330 SNF2_N 228 474
IPR010666 Znf_GRF 12 50
No external refs found!