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  5. EOD19003

EOD19003


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD19003
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Sro53_g031580.1 Contig1592.g14498 Cold-inducible RNA-binding protein 0.01 OrthoFinder
XM_002501176.1 MICPUN_108032, 108032 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21091.1_4905 PRW21091 Peptidyl-prolyl cis-trans isomerase E 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493035.1_2771 KAA8493035 Cold-inducible RNA-binding protein B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 85
No external refs found!