1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD18860

EOD18860


Description : Ribosomal protein L22e [Interproscan].


Gene families : OG_01_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD18860
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001206.7 tig00001206_g7490.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre07.g357850 30774301, RPL22 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz08g30250.t1 No alias Ribosomal protein L22e [Interproscan]. 0.07 OrthoFinder
Dusal.0067s00003.1 33194677 Ribosomal protein L22e [Interproscan]. 0.08 OrthoFinder
OT_12G02920.1 No alias Ribosomal protein L22e [Interproscan]. 0.07 OrthoFinder
PTI_20G02050.1 No alias Ribosomal protein L22e [Interproscan]. 0.11 OrthoFinder
Sro89_g046870.1 Contig3846.g29608 60S ribosomal protein L22 0.09 OrthoFinder
TP06G02320.1 No alias Ribosomal protein L22e [Interproscan]. 0.07 OrthoFinder
Transcript_contig_80087 80087 Ribosomal protein L22e [Interproscan]. 0.01 OrthoFinder
Vocar.0051s0045.1 32886996 Ribosomal protein L22e [Interproscan]. 0.03 OrthoFinder
XM_002499837.1 MICPUN_90144, 90144 Ribosomal protein L22e [Interproscan]. 0.06 OrthoFinder
XM_003055223.1 MicpuC2_31192, 31192 Ribosomal protein L22e [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39267.1_2590 PRW39267 60S ribosomal L22-2 0.08 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499191.1_8144 KAA8499191 60S ribosomal protein L22 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 11 118
No external refs found!