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  5. Cpa|evm.model.tig00020996.22

Cpa|evm.model.tig00020996.22 (tig00020996_g16936.t1)


Aliases : tig00020996_g16936.t1

Description : Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020996.22
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
PTI_03G05300.1 No alias ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase,... 0.02 OrthoFinder
PTI_04G03480.1 No alias ClpA/ClpB, AAA lid domain; ATPase, AAA-type, core; Clp... 0.02 OrthoFinder
Transcript_contig_54694 54694 ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.02 OrthoFinder
Transcript_contig_55166 55166 ClpA/ClpB, AAA lid domain; Clp ATPase, C-terminal;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 73 147
IPR041546 ClpA/ClpB_AAA_lid 234 288
IPR041546 ClpA/ClpB_AAA_lid 202 233
IPR003959 ATPase_AAA_core 449 607
No external refs found!