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  5. EOD18443

EOD18443


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD18443
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold5375.1 5375.1 Regulator of chromosome condensation (RCC1) repeat;... 0.05 OrthoFinder
XM_003063490.1 MicpuC2_53295, 53295 Regulator of chromosome condensation, RCC1; Ankyrin... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 102 152
IPR000408 Reg_chr_condens 211 255
IPR000408 Reg_chr_condens 373 422
IPR000408 Reg_chr_condens 260 308
IPR000408 Reg_chr_condens 155 204
No external refs found!