Description : Carotenoid oxygenase [Interproscan].

Gene families : OG_01_0000773 (OrthoFinder) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EOD18175
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021179.40 tig00021179_g19254.t1 Carotenoid cleavage dioxygenase 7, chloroplastic... 0.04 OrthoFinder
Cre16.g657800 30777499, CCD3 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Pisum sativum 0.1 OrthoFinder
Cz01g15060.t1 No alias Carotenoid oxygenase [Interproscan]. 0.01 OrthoFinder
Cz09g31270.t1 No alias Carotenoid oxygenase [Interproscan]. 0.11 OrthoFinder
OT_03G03940.1 No alias Carotenoid oxygenase [Interproscan]. 0.04 OrthoFinder
OT_03G05690.1 No alias Carotenoid oxygenase [Interproscan]. 0.07 OrthoFinder
PTI_02G02900.1 No alias Carotenoid oxygenase [Interproscan]. 0.05 OrthoFinder
Sro11_g008590.1 Contig724.g8333 Apocarotenoid-15,15'-oxygenase 0.02 OrthoFinder
TP05G00630.1 No alias Carotenoid oxygenase [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54945 54945 Carotenoid oxygenase [Interproscan]. 0.03 OrthoFinder
Vocar.0004s0072.1 32889789 Carotenoid oxygenase [Interproscan]. 0.03 OrthoFinder
XM_002499814.1 MICPUN_56538, 56538 Carotenoid oxygenase [Interproscan]. 0.05 OrthoFinder
lcl|VRMN01000013.1_cds_KAA8491528.1_6338 KAA8491528 Apocarotenoid-15,15'-oxygenase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 330 486
IPR004294 Carotenoid_Oase 56 296
No external refs found!