EOD17403


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002875 (OrthoFinder) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD17403
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.5 tig00001339_g8261.t1 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder
Cre26.g756797 30778304 Protein degradation.26S proteasome.20S core... 0.16 OrthoFinder
Cz09g32010.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
Dusal.0321s00008.1 33203157 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
OT_08G04050.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_00G00010.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.11 OrthoFinder
Sro1228_g254360.1 Contig2695.g21737 Proteasome subunit beta type-1 0.11 OrthoFinder
Sro335_g119990.1 Contig3868.g29756 Proteasome subunit beta type-1 0.16 OrthoFinder
TP01G00130.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.12 OrthoFinder
Transcript_contig_56013 56013 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
Vocar.0014s0257.1 32888681 Proteasome, subunit alpha/beta [Interproscan]. 0.06 OrthoFinder
XM_002501730.1 MICPUN_81202, 81202 Proteasome, subunit alpha/beta [Interproscan]. 0.1 OrthoFinder
XM_003058479.1 MicpuC2_17183, 17183 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01002663.1_cds_GFH24902.1_19379 HaLaN_22779, GFH24902 Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20914.1_5022 PRW20914 Proteasome subunit beta type-1 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494675.1_3205 KAA8494675 Proteasome subunit beta type-1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000176 nuclear exosome (RNase complex) IEP Enrichment
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
BP GO:0031204 posttranslational protein targeting to membrane, translocation IEP Enrichment
CC GO:0031207 Sec62/Sec63 complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 31 226
No external refs found!