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  5. Cpa|evm.model.tig00020965.25

Cpa|evm.model.tig00020965.25 (tig00020965_g16841.t1)


Aliases : tig00020965_g16841.t1

No description available


Gene families : OG_01_0011527 (OrthoFinder) Phylogenetic Tree(s): OG0011527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020965.25
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1519.2 1519.2 D-glutamate cyclase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008409 5'-3' exonuclease activity IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR009906 D-Glu_cyclase 107 247
No external refs found!