EOD16250

Description : Histone H2A, C-terminal domain; Histone H2A/H2B/H3 [Interproscan].

Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD16250
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
EOD11956	No alias	Putative histone H2A [Ensembl].	0.03	OrthoFinder
Sro228_g092700.1	Contig1235.g11584	Histone H2A	0.02	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20373.1_5594	PRW20373	Histone H2A	0.02	OrthoFinder
lcl\|LHPG02000024.1_cds_PRW20423.1_5589	PRW20423	Histone H2A	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004650	polygalacturonase activity	IEP	Enrichment
MF	GO:0005198	structural molecule activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0008150	biological_process	IEP	Enrichment
BP	GO:0008152	metabolic process	IEP	Enrichment
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0015696	ammonium transport	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
BP	GO:0016567	protein ubiquitination	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
CC	GO:0030118	clathrin coat	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030125	clathrin vesicle coat	IEP	Enrichment
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Enrichment
CC	GO:0030132	clathrin coat of coated pit	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0044238	primary metabolic process	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071704	organic substance metabolic process	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:0098797	plasma membrane protein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	90	122
IPR007125	Histone_H2A/H2B/H3	10	87

External Links

No external refs found!

EOD16250

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation