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  5. EOD15375

EOD15375


Description : Light harvesting protein [Ensembl].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD15375
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365900 30773702, LHCSR1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder
Cz16g02040.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_02G04020.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_04G04620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_15G00620.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Sro1207_g252450.1 Contig242.g2948 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro122_g059170.1 Contig71.g736 Chloroplastic 0.02 OrthoFinder
Sro132_g062570.1 Contig2745.g22100 Chloroplastic 0.03 OrthoFinder
Sro1347_g264950.1 Contig4640.g34581 B binding protein 6, chloroplastic 0.03 OrthoFinder
Sro1430_g271970.1 Contig4579.g34184 B binding protein L1818, chloroplastic 0.04 OrthoFinder
Sro149_g068330.1 Contig259.g3201 Chloroplastic 0.03 OrthoFinder
Sro149_g068340.1 Contig259.g3202 B binding protein L1818, chloroplastic 0.01 OrthoFinder
Sro1506_g278310.1 Contig3888.g29862 Chloroplastic 0.03 OrthoFinder
Sro2423_g327210.1 Contig3569.g27581 Chloroplastic 0.03 OrthoFinder
Sro288_g108750.1 Contig62.g495 B binding protein L1818, chloroplastic 0.02 OrthoFinder
Sro412_g137900.1 Contig2922.g23262 Chloroplastic 0.03 OrthoFinder
Sro60_g034620.1 Contig797.g8939 Chloroplastic 0.02 OrthoFinder
Sro652_g181650.1 Contig2024.g17318 Chloroplastic 0.03 OrthoFinder
Sro656_g182410.1 Contig256.g3152 Chloroplastic 0.05 OrthoFinder
Sro698_g189300.1 Contig480.g6500 Chlorophyll a 0.03 OrthoFinder
Sro698_g189330.1 Contig480.g6503 Chloroplastic 0.03 OrthoFinder
Sro829_g208070.1 Contig1016.g10166 Chloroplastic 0.03 OrthoFinder
Sro844_g209920.1 Contig403.g5457 Chloroplastic 0.04 OrthoFinder
TP05G05630.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
XM_002506509.1 MICPUN_105009, 105009 Chlorophyll a/b-binding protein (LI818R) 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 74 219
No external refs found!