- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Glycoside hydrolase, family 28 [Interproscan].
Gene families : OG_01_0001702 (OrthoFinder) Phylogenetic Tree(s): OG0001702_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD14884 | |
| Cluster | HCCA: Cluster_154 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro60_g034580.1 | Contig797.g8935 | Major Facilitator Superfamily | 0.02 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW58958.1_7031 | PRW58958 | MFS family transporter: sugar | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
| MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | Enrichment |
| MF | GO:0004386 | helicase activity | IEP | Enrichment |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006749 | glutathione metabolic process | IEP | Enrichment |
| BP | GO:0006750 | glutathione biosynthetic process | IEP | Enrichment |
| BP | GO:0006826 | iron ion transport | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Enrichment |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
| BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Enrichment |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Enrichment |
| MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 54 | 379 |
| No external refs found! |