EOD14880

Description : Transcription initiation factor IIA, gamma subunit, C-terminal; Transcription initiation factor IIA, gamma subunit, N-terminal [Interproscan].

Gene families : OG_01_0004501 (OrthoFinder) Phylogenetic Tree(s): OG0004501_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD14880

Target	Alias	Description	ECC score	Gene Family Method
OT_02G00100.1	No alias	Transcription initiation factor IIA, gamma subunit,...	0.02	OrthoFinder
lcl\|BLLF01001205.1_cds_GFH17815.1_12292	HaLaN_14521, GFH17815	HNHc domain-containing protein	0.01	OrthoFinder
lcl\|VRMN01000005.1_cds_KAA8494068.1_3932	KAA8494068	Transcription initiation factor IIA subunit 2	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005672	transcription factor TFIIA complex	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006352	DNA-templated transcription, initiation	None	Extended
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004659	prenyltransferase activity	IEP	Enrichment
CC	GO:0005956	protein kinase CK2 complex	IEP	Enrichment
MF	GO:0008318	protein prenyltransferase activity	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
BP	GO:0018342	protein prenylation	IEP	Enrichment
MF	GO:0019207	kinase regulator activity	IEP	Enrichment
MF	GO:0019887	protein kinase regulator activity	IEP	Enrichment
BP	GO:0097354	prenylation	IEP	Enrichment
CC	GO:0140535	intracellular protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR015871	TFIIA_gsu_C	84	132
IPR015872	TFIIA_gsu_N	3	46

External Links

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EOD14880

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation