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  5. EOD14847

EOD14847


Description : Endonuclease/exonuclease/phosphatase; AMP-dependent synthetase/ligase [Interproscan].


Gene families : OG_01_0000298 (OrthoFinder) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD14847
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Cz01g36150.t1 No alias AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
Cz05g30060.t1 No alias AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder
EOD15182 No alias AMP-dependent synthetase/ligase [Interproscan]. 0.03 OrthoFinder
EOD37178 No alias Acyl-CoA synthetase, long-chain [Ensembl]. 0.02 OrthoFinder
PTI_07G04290.1 No alias AMP-dependent synthetase/ligase [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0276.1 32898062 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.03 OrthoFinder
lcl|BLLF01000766.1_cds_GFH14784.1_9261 HaLaN_10898, GFH14784 AMP-binding enzyme, C-terminal domain; AMP-dependent... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 857 1029
IPR000873 AMP-dep_Synth/Lig 1041 1094
IPR000873 AMP-dep_Synth/Lig 745 848
IPR005135 Endo/exonuclease/phosphatase 324 622
No external refs found!