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EOD14122


Description : Putative ABC transporter [Ensembl].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD14122
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00021434.18 tig00021434_g21315.t1 ABC transporter B family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre16.g692300 30777566 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre17.g725200 30782751 ABC transporter B family member 12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz07g17170.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Cz07g26080.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Dusal.0274s00010.1 33185624 ABC transporter type 1, transmembrane domain [Interproscan]. 0.01 OrthoFinder
EOD31962 No alias Putative ABC transporter [Ensembl]. 0.05 OrthoFinder
EOD31963 No alias Putative ABC transporter [Ensembl]. 0.06 OrthoFinder
TP05G00300.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
Transcript_contig_54412 54412 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
XM_003057040.1 MicpuC2_1092, 1092 ATP-binding cassette superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015743 malate transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 150 249
No external refs found!