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  5. EOD14007

EOD14007


Description : Histone H2A, C-terminal domain; Histone H2A/H2B/H3 [Interproscan].


Gene families : OG_01_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD14007
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001085.4 tig00001085_g6945.t1 Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder
Cre06.g264750 30778682, HTA14 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g264950 30779952 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g265350 30779523 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g266700 30779158 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g268050 30779224, HTA10 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g268300 30778781, HTA9 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g271350 30779391 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g273900 30779778 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g274200 30778751 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g274800 30780111, HTA26 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g275850 30779335 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g276500 30778822, HTA23 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre06.g276950 30778754, HTA24 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre12.g504500 30793209 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre12.g504750 30792225 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre12.g505550 30793129 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre12.g506250 30793152, HTA18 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre13.g567700 30783996 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre13.g570100 30784159, HTA2 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre13.g590800 30783997, HTA37 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre13.g591150 30784726, HTA38 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g708550 30781878, HTA20 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g709200 30782358 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g710400 30782701, HTA19 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g711700 30781638, HTA5 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g713400 30781819 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cre17.g714500 30782017, HTA1 Chromatin organisation.histones.H2A-type histone 0.01 OrthoFinder
Cz02g02050.t1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Dusal.0093s00005.1 33185357 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0093s00031.1 33185335 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Dusal.0093s00037.1 33185342 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Dusal.0165s00013.1 33193367 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Dusal.0165s00017.1 33193347 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.03 OrthoFinder
Dusal.0688s00003.1 33202688 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
Dusal.0806s00004.1 33190343 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
OT_16G01100.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.01 OrthoFinder
TP05G07700.1 No alias Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0001s1633.1 32885235 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
Vocar.0006s0196.1 32893915 Histone H2A/H2B/H3; Histone H2A, C-terminal domain... 0.02 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57021.1_9025 PRW57021 Histone H2A 0.03 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57065.1_9163 PRW57065 Histone H2A 0.03 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32875.1_3737 PRW32875 Histone H2A 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32884.1_3815 PRW32884 Histone H2A 0.02 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32926.1_3778 PRW32926 Histone H2A 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33066.1_3814 PRW33066 Histone H2A 0.02 OrthoFinder
lcl|VRMN01000010.1_cds_KAA8492219.1_5402 KAA8492219 Histone H2A.V 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 94
IPR032454 Histone_H2A_C 95 125
No external refs found!