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  5. EOD13894

EOD13894


Description : Eukaryotic rRNA processing [Interproscan].


Gene families : OG_01_0003056 (OrthoFinder) Phylogenetic Tree(s): OG0003056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD13894
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000880.12 tig00000880_g5169.t1 Probable rRNA-processing protein EBP2 homolog... 0.08 OrthoFinder
Cre07.g351750 30774969 Probable rRNA-processing protein EBP2 homolog... 0.04 OrthoFinder
OT_12G01740.1 No alias Eukaryotic rRNA processing [Interproscan]. 0.03 OrthoFinder
PTI_01G11480.1 No alias Eukaryotic rRNA processing [Interproscan]. 0.04 OrthoFinder
Sro229_g093170.1 Contig429.g5821 Processing protein EBP2 0.06 OrthoFinder
TP09G02570.1 No alias Eukaryotic rRNA processing [Interproscan]. 0.02 OrthoFinder
Transcript_contig_78547 78547 Eukaryotic rRNA processing [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000472.1_cds_GFH12146.1_6623 HaLaN_07781, GFH12146 Eukaryotic rRNA processing [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002840.1_cds_GFH25532.1_20009 HaLaN_23512, GFH25532 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33635.1_3205 PRW33635 Putative rRNA-processing EBP2-like protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR008610 Ebp2 20 193
No external refs found!