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  5. EOD13723

EOD13723


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD13723
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000842.16 tig00000842_g4836.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001155.20 tig00001155_g7327.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
PTI_22G00150.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
PTI_22G01940.1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Sro66_g037140.1 Contig399.g5384 Protein ligase RNF12 0.05 OrthoFinder
SymbC1.scaffold2576.1 2576.1 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5815.1 5815.1 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494124.1_3988 KAA8494124 E3 ubiquitin-protein ligase ATL9 0.01 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490863.1_5635 KAA8490863 E3 ubiquitin-protein ligase SDIR1 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 67 112
No external refs found!