EOD13570

Description : Putative PAS domain sensor hybrid histidine kinase [Ensembl].

Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD13570
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000093.27	tig00000093_g3462.t1	Ethylene receptor 1 OS=Brassica oleracea	0.03	OrthoFinder
Cpa\|evm.model.tig00000190.40	tig00000190_g13861.t1	Ethylene receptor OS=Nicotiana tabacum	0.02	OrthoFinder
Cpa\|evm.model.tig00000227.31	tig00000403_g305.t1	Histidine kinase 5 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00000403.48	tig00000403_g305.t1	Ethylene response sensor 1 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00000870.26	tig00000870_g5140.t1	Histidine kinase 5 OS=Arabidopsis thaliana	0.01	OrthoFinder
Cpa\|evm.model.tig00021179.53	tig00021179_g19270.t1	Probable histidine kinase 5 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder
Dusal.0119s00011.1	33195183	Signal transduction response regulator, receiver domain...	0.02	OrthoFinder
Dusal.0121s00015.1	33195087	Archaeal/bacterial/fungal rhodopsins; Histidine...	0.02	OrthoFinder
Sro168_g074900.1	Contig1642.g14821	Sensor kinase/phosphatase LuxQ	0.01	OrthoFinder
SymbC1.scaffold19.340	19.340	Transposase, zinc-ribbon; Magnesium chelatase ChlI...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Enrichment
MF	GO:0004019	adenylosuccinate synthase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006163	purine nucleotide metabolic process	IEP	Enrichment
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006468	protein phosphorylation	IEP	Enrichment
BP	GO:0006793	phosphorus metabolic process	IEP	Enrichment
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Enrichment
BP	GO:0006807	nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0006886	intracellular protein transport	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
BP	GO:0006996	organelle organization	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008146	sulfotransferase activity	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
BP	GO:0016197	endosomal transport	IEP	Enrichment
BP	GO:0016310	phosphorylation	IEP	Enrichment
BP	GO:0016482	cytosolic transport	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
CC	GO:0030120	vesicle coat	IEP	Enrichment
CC	GO:0030127	COPII vesicle coat	IEP	Enrichment
CC	GO:0030906	retromer, cargo-selective complex	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
BP	GO:0051276	chromosome organization	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0072521	purine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003594	HATPase_C	1762	1903
IPR003661	HisK_dim/P	1650	1715
IPR000014	PAS	29	118
IPR013767	PAS_fold	895	1006
IPR013767	PAS_fold	514	625
IPR013767	PAS_fold	260	371
IPR013767	PAS_fold	1530	1628
IPR013767	PAS_fold	1276	1387
IPR013767	PAS_fold	1403	1514
IPR013767	PAS_fold	1022	1133
IPR013767	PAS_fold	1149	1260
IPR013767	PAS_fold	768	879
IPR013767	PAS_fold	387	498
IPR013767	PAS_fold	133	244
IPR013767	PAS_fold	641	752

External Links

No external refs found!

EOD13570

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation