EOD12782


Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].


Gene families : OG_01_0000401 (OrthoFinder) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD12782
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
EOD14131 No alias Zinc finger, C3HC4 type (RING finger) [Interproscan]. 0.01 OrthoFinder
EOD26544 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
EOD37234 No alias Zinc finger, C3HC4 type (RING finger) [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0007029 endoplasmic reticulum organization IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment

No InterPro domains available for this sequence

No external refs found!