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  5. EOD12704

EOD12704


Description : Alpha-tubulin [Ensembl].


Gene families : OG_01_0000699 (OrthoFinder) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD12704
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.34 tig00000237_g20483.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder
Cpa|evm.model.tig00000404.34 tig00000404_g397.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cre03.g190950 30788226, TUA1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cre04.g216850 30791599, TUA2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cz07g00160.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
Cz11g05030.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
EOD12836 No alias Alpha-tubulin [Ensembl]. 0.05 OrthoFinder
EOD15554 No alias Alpha-tubulin [Ensembl]. 0.02 OrthoFinder
EOD22056 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
EOD29196 No alias Alpha-tubulin [Ensembl]. 0.05 OrthoFinder
OT_12G01250.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.03 OrthoFinder
Sro102_g052160.1 Contig319.g4260 Tubulin alpha chain (Fragment) 0.03 OrthoFinder
Sro1718_g293350.1 Contig3856.g29683 Tubulin alpha chain (Fragment) 0.04 OrthoFinder
SymbC1.scaffold1680.5 1680.5 Tubulin/FtsZ, GTPase domain [Interproscan]. 0.01 OrthoFinder
TP09G01530.1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.04 OrthoFinder
Transcript_contig_58863 58863 Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.01 OrthoFinder
XM_002506021.1 MICPUN_92378, 92378 Alpha tubulin 1 (TUA1) 0.02 OrthoFinder
XM_002507964.1 MICPUN_94939, 94939 Alpha tubulin 2 (TUA2) 0.02 OrthoFinder
lcl|BLLF01000929.1_cds_GFH15979.1_10456 HaLaN_12318, GFH15979 Tubulin alpha chain 0.01 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58554.1_7753 PRW58554 Tubulin alpha chain 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495544.1_1542 KAA8495544 Tubulin alpha-2 chain 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 300 419
IPR003008 Tubulin_FtsZ_GTPase 44 250
No external refs found!