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  5. EOD12304

EOD12304


Description : K Homology domain, type 2 [Interproscan].


Gene families : OG_01_0003293 (OrthoFinder) Phylogenetic Tree(s): OG0003293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD12304
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021462.41 tig00021462_g21604.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder
Cre02.g102250 30785015, RPS3 Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder
Cz02g33150.t1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.03 OrthoFinder
OT_04G01280.1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.03 OrthoFinder
PTI_04G00160.1 No alias K Homology domain, type 2; Ribosomal protein S3,... 0.04 OrthoFinder
Sro694_g188530.1 Contig4437.g33306 40S ribosomal protein S3 0.03 OrthoFinder
SymbC1.scaffold12787.1 12787.1 Ribosomal protein S3, C-terminal [Interproscan]. 0.02 OrthoFinder
XM_002508158.1 MICPUN_91459, 91459 Ribosomal protein S3, C-terminal; K Homology domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
MF GO:1904680 peptide transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 20 93
No external refs found!