EOD12033

Description : Ribosomal protein S21e [Interproscan].

Gene families : OG_01_0003705 (OrthoFinder) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD12033
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g203450	30787782, RPS21	Protein biosynthesis.cytosolic ribosome.small subunit...	0.16	OrthoFinder
Dusal.0001s00040.1	33198798	Ribosomal protein S21e [Interproscan].	0.06	OrthoFinder
OT_16G01860.1	No alias	Ribosomal protein S21e [Interproscan].	0.07	OrthoFinder
PTI_25G00250.1	No alias	Ribosomal protein S21e [Interproscan].	0.12	OrthoFinder
Sro6_g004850.1	Contig175.g1990	40S ribosomal protein S21	0.13	OrthoFinder
TP04G05880.1	No alias	Ribosomal protein S21e [Interproscan].	0.12	OrthoFinder
Vocar.0011s0134.1	32895267	Ribosomal protein S21e [Interproscan].	0.06	OrthoFinder
XM_002506478.1	MICPUN_109558, 109558	Ribosomal protein S21e [Interproscan].	0.13	OrthoFinder
XM_003063433.1	MicpuC2_45937, 45937	Ribosomal protein S21e [Interproscan].	0.07	OrthoFinder
lcl\|BLLF01004584.1_cds_GFH29895.1_24372	HaLaN_28641, GFH29895	40S ribosomal protein S21	0.03	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60607.1_4698	PRW60607	40S ribosomal S21-2	0.11	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498324.1_7277	KAA8498324	40S ribosomal protein S21	0.12	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Enrichment
CC	GO:0005787	signal peptidase complex	IEP	Enrichment
CC	GO:0005839	proteasome core complex	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006465	signal peptide processing	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Enrichment
BP	GO:0034404	nucleobase-containing small molecule biosynthetic process	IEP	Enrichment
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Enrichment
BP	GO:0044248	cellular catabolic process	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Enrichment
MF	GO:0070003	threonine-type peptidase activity	IEP	Enrichment
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Enrichment
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Enrichment
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Enrichment
BP	GO:0071569	protein ufmylation	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Enrichment
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
BP	GO:1901575	organic substance catabolic process	IEP	Enrichment
CC	GO:1905368	peptidase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001931	Ribosomal_S21e	1	73

External Links

No external refs found!

EOD12033

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation